Man pages for ririzarr/bumphunter
Bump Hunter

annotateNearestAnnotate the results of nearest
annotateTranscriptsAnnotate transcripts
bumphunterBumphunter
clusterMakerMake clusters of genomic locations based on distance
dummyDataGenerate dummy data for use with bumphunter functions
getSegmentsSegment a vector into positive, zero, and negative regions
locfitByClusterApply local regression smoothing to values within each...
loessByClusterApply loess smoothing to values within each spatially-defined...
matchGenesFind and annotate closest genes to genomic regions
regionFinderFind non-zero regions in vector
runmedByClusterApply running median smoothing to values within each...
smootherSmooth genomic profiles
TTExample data
ririzarr/bumphunter documentation built on March 20, 2024, 8:08 a.m.