tests/testthat/test_utils.R

In prostarproteomics/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R

context("Utils")

require(DAPARdata)
data(Exp1_R2_pept)
obj <- Exp1_R2_pept
test <- Exp1_R2_pept[130:140]
test2 <- Exp1_R2_pept[20:28]


#
#
# test_that("getProcessingInfo", {
#     expect_equal(getProcessingInfo(Exp1_R2_pept), "Log2 tranformed data")
# })
#
#
# test_that("getNumberOfEmptyLines", {
#     expect_equal(getNumberOfEmptyLines(exprs(Exp1_R2_pept)), 715)
# })
#
#
# test_that("getIndicesConditions", {
#     labels <- Biobase::pData(Exp1_R2_pept)[,"Condition"]
#     l <- list(iCond1=c(1,2,3), iCond2=c(4,5,6))
#     expect_equal(getIndicesConditions(labels, "10fmol", "5fmol"), l)
# })
#