examples/ex_BuildColumnToProteinDataset.R
In prostarproteomics/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R
data(Exp1_R25_pept, package="DAPARdata")
protID <- "Protein_group_IDs"
obj.pep <- Exp1_R25_pept[seq_len(10)]
M <- BuildAdjacencyMatrix(obj.pep, protID, FALSE)
data <- Biobase::fData(obj.pep)
protData <- aggregateMean(obj.pep, M)
name <- "Protein_group_IDs"
proteinNames <- rownames(Biobase::fData(protData$obj.prot))
new.col <- BuildColumnToProteinDataset(data, M, name, proteinNames)
prostarproteomics/DAPAR documentation built on Oct. 11, 2024, 12:03 p.m.
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data(Exp1_R25_pept, package="DAPARdata")
protID <- "Protein_group_IDs"
obj.pep <- Exp1_R25_pept[seq_len(10)]
M <- BuildAdjacencyMatrix(obj.pep, protID, FALSE)
data <- Biobase::fData(obj.pep)
protData <- aggregateMean(obj.pep, M)
name <- "Protein_group_IDs"
proteinNames <- rownames(Biobase::fData(protData$obj.prot))
new.col <- BuildColumnToProteinDataset(data, M, name, proteinNames)
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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