getProteinsStats: Computes the number of proteins that are only defined by...
In prostarproteomics/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R
getProteinsStats R Documentation
Computes the number of proteins that are only defined by
specific peptides, shared peptides or a mixture of two.
Description
This function computes the number of proteins that are only defined by
specific peptides, shared peptides or a mixture of two.
Usage
getProteinsStats(matShared)
Arguments
matShared
The adjacency matrix with both specific and
shared peptides.
Value
A list
Author(s)
Samuel Wieczorek
Examples
data(Exp1_R25_pept, package="DAPARdata")
protID <- "Protein_group_IDs"
obj <- Exp1_R25_pept[seq_len(20)]
MShared <- BuildAdjacencyMatrix(obj, protID, FALSE)
getProteinsStats(matShared = MShared)
prostarproteomics/DAPAR documentation built on Oct. 11, 2024, 12:03 p.m.
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| getProteinsStats | R Documentation |
Computes the number of proteins that are only defined by specific peptides, shared peptides or a mixture of two.
Description
This function computes the number of proteins that are only defined by specific peptides, shared peptides or a mixture of two.
Usage
getProteinsStats(matShared)
Arguments
matShared |
The adjacency matrix with both specific and shared peptides. |
Value
A list
Author(s)
Samuel Wieczorek
Examples
data(Exp1_R25_pept, package="DAPARdata")
protID <- "Protein_group_IDs"
obj <- Exp1_R25_pept[seq_len(20)]
MShared <- BuildAdjacencyMatrix(obj, protID, FALSE)
getProteinsStats(matShared = MShared)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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