GetMetacellTags: List of metacell tags

In prostarproteomics/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R

List of metacell tags

Description

This function gives the list of metacell tags available in DAPAR.

- onlyPresent: In this case, the function gives the tags found in a dataset. In addition, and w.r.t to the hierarchy of tags, if all leaves of a node are present, then the tag corresponding to this node is added.

Usage

GetMetacellTags(level = NULL, obj = NULL, onlyPresent = FALSE, all = FALSE)

Arguments

level	xxx
obj	An object of class MSnSet
onlyPresent	A boolean that indicates if one wants a list with only the tags present in the dataset.
all	A boolean that indicates if one wants the whole list

Value

A vector of tags..

Author(s)

Samuel Wieczorek

Examples

data(Exp1_R25_pept, package="DAPARdata")
obj <- Exp1_R25_pept
GetMetacellTags(level="peptide")
GetMetacellTags(level="peptide", obj, onlyPresent=TRUE)

prostarproteomics/DAPAR documentation built on Oct. 11, 2024, 12:03 p.m.