In phylotastic/datelife: Scientific Data on Time of Lineage Divergence for Your Taxa

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)

library(datelife)
library(phangorn)

When we have no initial branch lengths to perform a phylogenetic dating analysis, we can use programs like BLADJ or MrBayes that can smooth node ages in the absence of any genetic data.

The function use_calibrations_bladj.matchedCalibrations() takes the output of function get_all_calibrations():

make_bold_otol_tree(input = "Canis")

phylotastic/datelife documentation built on June 9, 2024, 6:50 p.m.