tests/testthat/test-import_narrowPeak.R
In neurogenomics/EpiCompare: Comparison, Benchmarking & QC of Epigenomic Datasets
test_that("import_narrowPeak works", {
path <- EpiCompare::write_example_peaks(datasets="encode_H3K27ac")
peaks <- rtracklayer::import(path, format = "narrowPeak")
testthat::expect_true(methods::is(peaks,"GRanges"))
testthat::expect_length(peaks,5142)
testthat::expect_equal(ncol(GenomicRanges::mcols(peaks)),6)
})
neurogenomics/EpiCompare documentation built on Oct. 18, 2024, 11:04 p.m.
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test_that("import_narrowPeak works", {
path <- EpiCompare::write_example_peaks(datasets="encode_H3K27ac")
peaks <- rtracklayer::import(path, format = "narrowPeak")
testthat::expect_true(methods::is(peaks,"GRanges"))
testthat::expect_length(peaks,5142)
testthat::expect_equal(ncol(GenomicRanges::mcols(peaks)),6)
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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