ncborcherding/escape: Easy single cell analysis platform for enrichment
A bridging R package to facilitate gene set enrichment analysis (GSEA) in the context of single-cell RNA sequencing. Using raw count information, Seurat objects, or SingleCellExperiment format, users can perform and visualize ssGSEA, GSVA, AUCell, and UCell-based enrichment calculations across individual cells.
Getting started
Browse package contents
Package details |
|
|---|---|
| Bioconductor views | Annotation Classification GeneSetEnrichment GeneSignaling Pathways Sequencing SingleCell Software |
| Maintainer | |
| License | MIT + file LICENSE |
| Version | 2.2.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
