R/epistasisGA.R

In mnodzenski/epistasisGA: An R package to identify multi-snp effects in nuclear family studies using the GADGETS method

#' \code{epistasisGA} package
#'
#' A package implementing the GADGETS method to detect multi-SNP effects in
#' case-parent triad or affected/unaffected sibling studies.
#'
#' @docType package
#' @name epistasisGA
NULL

## quiets concerns re visible bindings of global vars created via data table
if (getRversion() >= "2.15.1") {

    utils::globalVariables(c("chromosome", ".SD", "fitness.score",
                             "raw.fitness.score", "Var1", "Var2", "name",
                             "cluster", "job.id", "V1", "V2", "edge.score",
                             "..choose.these", "..these.cols", "..rsid.cols",
                             "SNP1", "SNP2", "SNP1.rsid", "SNP2.rsid",
                             "NA_INTEGER", "..allele.copy.cols",
                             "..risk.sign.cols","graphical.score", "data.type",
                             "raw.score", "SNP", "pair.score", "rsid",
                             "snp.score", "..target.cols", "..orig.target.cols",
                             "..new.target.cols", "..o.dv.and.fit.cols",
                             "..not.these"))

}