lcolladotor/derfinder: Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach
This package provides functions for annotation-agnostic differential expression analysis of RNA-seq data. Two implementations of the DER Finder approach are included in this package: (1) single base-level F-statistics and (2) DER identification at the expressed regions-level. The DER Finder approach can also be used to identify differentially bounded ChIP-seq peaks.
Getting started
Browse package contents
Package details |
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| Bioconductor views | ChIPSeq Coverage DifferentialExpression DifferentialPeakCalling ImmunoOncology RNASeq Sequencing Software |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 1.39.0 |
| URL | https://github.com/lcolladotor/derfinder |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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