kroganlab/artMS: Analytical R tools for Mass Spectrometry
artMS provides a set of tools for the analysis of proteomics label-free datasets. It takes as input the MaxQuant search result output (evidence.txt file) and performs quality control, relative quantification using MSstats, downstream analysis and integration. artMS also provides a set of functions to re-format and make it compatible with other analytical tools, including, SAINTq, SAINTexpress, Phosfate, and PHOTON. Check [http://artms.org](http://artms.org) for details.
Getting started
Browse package contents
Package details |
|
|---|---|
| Bioconductor views | Annotation BiomedicalInformatics Clustering DifferentialExpression GeneSetEnrichment ImmunoOncology MassSpectrometry MultipleComparison Normalization Proteomics QualityControl SystemsBiology |
| Maintainer | |
| License | GPL (>= 3) + file LICENSE |
| Version | 1.10.3 |
| URL | http://artms.org |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
