Volcano plots represent a useful way to visualise the results of differential expression analyses. Here, we present a highly-configurable function that produces publication-ready volcano plots. EnhancedVolcano will attempt to fit as many point labels in the plot window as possible, thus avoiding 'clogging' up the plot with labels that could not otherwise have been read. Other functionality allows the user to identify up to 4 different types of attributes in the same plot space via colour, shape, size, and shade parameter configurations.
Package details |
|
---|---|
Bioconductor views | DifferentialExpression GeneExpression ImmunoOncology RNASeq Transcription |
Maintainer | Kevin Blighe <kevin@clinicalbioinformatics.co.uk> |
License | GPL-3 |
Version | 1.13.2 |
URL | https://github.com/kevinblighe/EnhancedVolcano |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.