jstansfield0/HMP2Data: 16s rRNA sequencing data from the Human Microbiome Project 2
HMP2Data is a Bioconductor package of the Human Microbiome Project 2 (HMP2) 16S rRNA sequencing data. Processed data is provided as phyloseq, SummarizedExperiment, and MultiAssayExperiment class objects. Individual matrices and data.frames used for building these S4 class objects are also provided in the package.
Getting started
Browse package contents
Package details |
|
|---|---|
| Author | John Stansfield <stansfieldjc@vcu.edu>, Ekaterina Smirnova <ekaterina.smirnova@vcuhealth.org>, Ni Zhao <nzhao10@jhu.edu>, Jennifer Fettweis <jennifer.fettweis@vcuhealth.org>, Levi Waldron <levi.waldron@sph.cuny.edu>, Mikhail Dozmorov <mikhail.dozmorov@vcuhealth.org> |
| Bioconductor views | ExperimentData Homo_sapiens_Data MicrobiomeData ReproducibleResearch SequencingData |
| Maintainer | John Stansfield <stansfieldjc@vcu.edu>, Ekaterina Smirnova <ekaterina.smirnova@vcuhealth.org> |
| License | Artistic-2.0 |
| Version | 1.3.0 |
| URL | https://github.com/jstansfield0/HMP2Data |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
