Files in jsilve24/philr
Phylogenetic partitioning based ILR transform for metagenomics data
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/branch_length_calculations.R
R/general_utils.R
R/name_balances.R
R/philr.R
R/phylo2sbp.R
R/plot_utils.R
R/weighted_ILR.R
README.md
docs/images/bg_hr.png
docs/images/blacktocat.png
docs/images/icon_download.png
docs/images/sprite_download.png
docs/index.html
docs/javascripts/main.js
docs/params.json
docs/stylesheets/github-light.css
docs/stylesheets/stylesheet.css
inst/CITATION
inst/NEWS
man/annotate_balance.Rd
man/buildilrBasep.Rd
man/calculate.blw.Rd
man/convert_to_long.Rd
man/g.colMeans.Rd
man/g.rowMeans.Rd
man/mean_dist_to_tips.Rd
man/miniclo.Rd
man/name.balance.Rd
man/name_nodenumber_conversion.Rd
man/named_rtree.Rd
man/philr.Rd
man/philrInv.Rd
man/phylo2sbp.Rd
man/shift.Rd
man/weighted_clr.Rd
man/weighted_ilr.Rd
philr.Rproj
tests/testthat.R
tests/testthat/test-BLcalcs.R
tests/testthat/test-general_utils.R
tests/testthat/test-philr.R
tests/testthat/test-wilr.R
vignettes/philr-intro.Rmd
vignettes/philr.bib
