roadmap/docs/03.methylation_utilities.md
In jokergoo/epik: Integrative Analysis and Visualization of Epigenomic Sequencing Data
Utilities for analyzing methylation data
First we configure how to read data:
source("~/project/development/epik/roadmap/data_config.R")
wgbs_qcplot(SAMPLE_ID[1])
wgbs_qcplot(SAMPLE_ID[1], background = CGI)
wgbs_qcplot(SAMPLE_ID[1], background = CGI_SHORE)
jokergoo/epik documentation built on Sept. 28, 2019, 9:20 a.m.
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Utilities for analyzing methylation data
First we configure how to read data:
source("~/project/development/epik/roadmap/data_config.R")
wgbs_qcplot(SAMPLE_ID[1])
wgbs_qcplot(SAMPLE_ID[1], background = CGI)
wgbs_qcplot(SAMPLE_ID[1], background = CGI_SHORE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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