split_node-HierarchicalPartition-method: Split node

In jokergoo/cola: A Framework for Consensus Partitioning

Split node

Description

Split node

Usage

## S4 method for signature 'HierarchicalPartition'
split_node(object, node_id,
    subset = object@param$subset,
    min_samples = object@param$min_samples, max_k = object@param$max_k, cores = object@param$cores,
    verbose = TRUE,
    top_n = object@param$top_n, min_n_signatures = object@param$min_n_signatures,
    group_diff = object@param$group_diff, fdr_cutoff = object@param$fdr_cutoff)

Arguments

object	A HierarchicalPartition-class object.
node_id	A single ID of a node that is going to be split.
subset	The same as in hierarchical_partition.
min_samples	The same as in hierarchical_partition.
max_k	max_k The same as in hierarchical_partition.
cores	Number of cores.
verbose	Whether to print messages.
top_n	The same as in hierarchical_partition.
min_n_signatures	The same as in hierarchical_partition.
group_diff	The same as in hierarchical_partition.
fdr_cutoff	The same as in hierarchical_partition.

Details

It applies hierarchical consensus partitioning on the specified node.

Value

A HierarchicalPartition-class object.

Examples

# There is no example
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jokergoo/cola documentation built on Feb. 29, 2024, 1:41 a.m.