jianhong/interactionHub: A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data
The GenomicInteractionNodes package can import interactions from bedpe file and define the interaction nodes, the genomic interaction sites with multiple interaction loops. The interaction nodes is a binding platform regulates one or multiple genes. The detected interaction nodes will be annotated for downstream validation.
Getting started
Browse package contents
Package details |
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| Bioconductor views | HiC Sequencing Software |
| Maintainer | |
| License | file LICENSE |
| Version | 0.99.7 |
| URL | https://github.com/jianhong/GenomicInteractionNodes |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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