ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data

test_that("getAnnotation works not correct", {
    #GRanges
    if(interactive()){
        mart<-useMart(biomart="ensembl",dataset="hsapiens_gene_ensembl")
        Annotation = getAnnotation(mart, featureType="TSS")
    }
})

jianhong/ChIPpeakAnno documentation built on Jan. 4, 2025, 5:27 p.m.

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jianhong/ChIPpeakAnno
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data

tests/testthat/test_getAnnotation.R
In jianhong/ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data

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jianhong/ChIPpeakAnno Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data

tests/testthat/test_getAnnotation.R In jianhong/ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data

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We want your feedback!

jianhong/ChIPpeakAnno
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data

tests/testthat/test_getAnnotation.R
In jianhong/ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data