ipumin/primirTSS: Prediction of pri-miRNA Transcription Start Site
A fast, convenient tool to identify the TSSs of miRNAs by integrating the data of H3K4me3 and Pol II as well as combining the conservation level and sequence feature, provided within both command-line and graphical interfaces, which achieves a better performance than the previous non-cell-specific methods on miRNA TSSs.
Getting started
Browse package contents
Package details |
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| Author | Pumin Li [aut, cre], Qi Xu [aut], Jie Li [aut], Jin Wang [aut] |
| Bioconductor views | GeneRegulation Genetics ImmunoOncology Preprocessing RNASeq Sequencing Transcription |
| Maintainer | Pumin Li <ipumin@163.com> |
| License | GPL-2 |
| Version | 1.7.1 |
| URL | https://github.com/ipumin/primirTSS |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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