hxin/topOnto: ontology enrichment analysis
TopOnto package provides tools for testing ontlogy terms while accounting for the topology of the ontology graph. Different test statistics and different methods for eliminating local similarities and dependencies between ontology terms can be implemented and applied. TopOnto package does similar job as the topGO package.The difference is that topOnto accept customize ontologies while topGO only support Gene Ontology.
Getting started
Browse package contents
Package details |
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| Author | Xin He |
| Bioconductor views | Microarray Software Visualization |
| Maintainer | xin he <xin.he@ed.ac.uk> |
| License | LGPL |
| Version | 0.99.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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