Man pages for hui-sheen/MetaGSCA
Meta-analysis of Gene Set differential Co-expression Analysis
| bootstrapP | Append final two bootstrap statistics |
| check_sd | Check gene-wise STD of each one matrix |
| dichotGSAR | Dichotomize p-value matrix to 0-1 matrix for each PW across... |
| GSAR_boot | Perform differential coexpression analysis on original and... |
| GSARboot_format | Assemble GSNACA results on original dataset and bootstrap... |
| gsnca_gsets | Run GSNCA over multiple gene sets |
| gsnca_p | Gene Sets Net Correlation Analysis (GSNCA) including... |
| gsnca_stat | Test statistics of Gene Sets Net Correlation Analysis (GSNCA) |
| input2PWcTalk | Example input data to pathway crosstalk analysis |
| meta | Minimum example inputs to MetaGSCA function |
| metaAndPlot | Perform GLMM or inverse variance meta-analysis |
| MetaGSCA | Meta-analysis of differential coexpression analysis |
| MetaGSCA_plot | Draw Forest plot based on metaprop() result |
| PWcTalk | Streamlined functions for Pathway Crosstalk Network analysis |
| PWcTalkNW | Draw pathway crosstalk network given a finite set of pathway... |
| PWcTalkNWpre | Cascaded steps in pathway crosstalk analyis prior to network... |
| PWsim | Calculate similarity measure for every pair of PWs |
| PWsimDichot | Dichotomize p-values of PW pairs according to pair p... |
