git-tjj/DtracePLN: DtracePLN: Sparse precision matrix estimation via lasso penalized D-trace loss in the multivariate Poisson log-normal model

DtracePLN is a package for calculating the precision matrix of poission log-normal model using moment method and dtrace loss. We first calculate the covariance matrix by moment method and then calculate the precision matrix by dtrace loss using R package EQUAL.

Getting started

Package details

AuthorFeiyi Xiao, Junjie Tang
Bioconductor views Gene Regulatory Network Inference SingleCell Software Transcription
MaintainerThe package maintainer <junjie.tang@pku.edu.cn>
LicenseGPL
Version0.2.0
URL https://github.com/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("git-tjj/DtracePLN")
git-tjj/DtracePLN documentation built on Jan. 30, 2023, 1:47 a.m.