tests/scratch/flmdef-wtf.R
In facilebio/FacileAnalysis: Modularized and interactive analyses over a FacileDataStore
devtools::install_local("~/facilebio/FacileShine", force = TRUE)
library(FacileData)
devtools::load_all(".")
fds <- FacileDataSet("/datasets/datastores/FacileDenaliCynoDataSet")
flm <- fds |>
filter_samples(study_name == "DST-215") |>
flm_def("group", "AL258_PSEG__mgkg60", "nonTV_TREM2__mgkg50")
res <- fdge(flm, filter_universe = features(fds) |> filter(meta == "protein_coding"))
r2 <- fdgeGadget(samples(flm))
facilebio/FacileAnalysis documentation built on Sept. 26, 2024, 5:13 a.m.
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devtools::install_local("~/facilebio/FacileShine", force = TRUE)
library(FacileData)
devtools::load_all(".")
fds <- FacileDataSet("/datasets/datastores/FacileDenaliCynoDataSet")
flm <- fds |>
filter_samples(study_name == "DST-215") |>
flm_def("group", "AL258_PSEG__mgkg60", "nonTV_TREM2__mgkg50")
res <- fdge(flm, filter_universe = features(fds) |> filter(meta == "protein_coding"))
r2 <- fdgeGadget(samples(flm))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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