Files in elimereu/matchSCore2
What the Package Does TODOELI
.Rbuildignore
.gitignore
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/.DS_Store
R/GO_annotation.R
R/align_run.R
R/compute_labels.R
R/cor_batch.R
R/cut_markers.R
R/defac.R
R/identity_heatmap.R
R/identity_map.R
R/markers_by_specificity.R
R/matchSCore-data.R
R/matchSCore.R
R/matchSCore2-pkg.R
R/matchSCore2.R
R/rank_sim.R
R/scores.R
R/seurat3_run.R
R/summary_barplot.R
R/summary_ggplot.R
R/tool_scores_by_specificity.R
R/train_model.R
R/tscores_plots.R
README.md
TODO.md
data/gene_cl.obs_bladder_droplet_TM.RData
data/gene_cl.ref_Chromium.RData
data/gene_cl.ref_bladder_SmartSeq2_TM.RData
data/gene_cl_MARS-Seq.RData
data/markers_quartzseq2.RData
inst/extdata/Clustering_vs_matchSCore_annotations.png
inst/extdata/Heatmap.png
inst/extdata/TSNE_MARS-Seq_clusters.png
inst/extdata/matchSCore2_Overview.png
man/GOannotation.Rd
man/align_run.Rd
man/compute_labels.Rd
man/cor_batch.Rd
man/cut_markers.Rd
man/defac_matrix.Rd
man/gene_cl.Rd
man/gene_cl.chromium.Rd
man/gene_cl.obs.Rd
man/gene_cl.ref.Rd
man/identity_heatmap.Rd
man/identity_map.Rd
man/markers.Rd
man/markers_by_specificity.Rd
man/matchSCore.Rd
man/matchSCore2-pkg.Rd
man/matchSCore2.Rd
man/rank_sim.Rd
man/scores.Rd
man/seurat3_run.Rd
man/summary_barplot.Rd
man/tool_scores_by_specificity.Rd
man/train_model.Rd
man/tscores_plots.Rd
matchSCore2.Rproj
vignettes/Cluster-sp_markers_comparison.png
vignettes/UMAP_celltype_after_integration.png
vignettes/UMAP_clusters_after_integration.png
vignettes/UMAP_dataset_after_integration.png
vignettes/UMAP_markers_after_integration.png
vignettes/identity_heatmaps.png
vignettes/matchSCore2.bib
vignettes/matchSCore2_usersguide.Rmd
vignettes/overview_package.png
vignettes/summary_barplots.png
