daewoooo/SVbyEye: Visualization of genomic structural variants
SVbyEye is an implements functions to detect and visualize genomic structural variation between two and multiple sequences. To achieve this, SVbyEye introduces 4 new ggplot2 geoms (geom_miropeats(), geom_arrowhead(), geom_roundrect(), and geom_wide_arc()) together with a number of other functions simplify oparations on FASTA alignments reported PAF format. A number of wrapper functions allows user to produce near publication ready figures.
Getting started
Browse package contents
Package details |
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| Bioconductor views | ComparativeGenomics GenomeAnnotation GenomicVariation Sequencing Software StructuralVariation VariantDetection WholeGenome |
| Maintainer | |
| License | MIT + file LICENSE |
| Version | 0.99.0 |
| URL | https://github.com/daewoooo/SVbyEye |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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