chagasVinicius/RTNmotifs: analysis of co-regulatory network motifs and inference of 'dual regulons'.
RTNduals is a tool that searches for possible co-regulatory loops between regulon pairs generated by the RTN package. It compares the shared targets in order to infer 'dual regulons', a new concept that tests whether regulon pairs agree on the predicted downstream effects.
Getting started
Browse package contents
Package details |
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| Author | Vinicius S. Chagas, Clarice S. Groeneveld, Gordon Robertson, Kerstin B. Meyer, Mauro A. A. Castro |
| Bioconductor views | GeneExpression GeneRegulation GeneSetEnrichment GeneticVariability GraphAndNetwork NetworkEnrichment NetworkInference |
| Maintainer | Vinicius Chagas <vinicius.chagas@ufpr.br>, Mauro Castro <mauro.castro@ufpr.br>, Clarice Groeneveld <clari.groeneveld@gmail.com> |
| License | Artistic-2.0 |
| Version | 0.99.3 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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