to_sparse: To 'sparseMatrix'

In bschilder/scKirby: Automated ingestion and conversion of various single-cell data formats.

To sparseMatrix

Description

Convert a matrix or data.frame to a sparseMatrix.

Usage

to_sparse(obj, transpose = FALSE, allow_delayed_array = TRUE, verbose = TRUE)

Arguments

obj	A single-cell object supported by scKirby. See converters for a table of all supported conversions.
transpose	Transpose the matrix with Matrix::t.
allow_delayed_array	Allow DelayedArray.
verbose	Print messages.

Value

A sparseMatrix.

Examples

obj <- data.frame(gene=paste0("gene",seq_len(10)),
                  matrix(data = 0,nrow=10,ncol = 20))
obj2 <- to_sparse(obj)

bschilder/scKirby documentation built on Oct. 2, 2024, 10:16 p.m.