seurat_to_h5seurat: Convert: 'Seurat' ==> 'H5Seurat'

In bschilder/scKirby: Automated ingestion and conversion of various single-cell data formats.

Convert: Seurat ==> H5Seurat

Description

Convert: Seurat ==> H5Seurat

Usage

seurat_to_h5seurat(
  obj,
  save_path = tempfile(fileext = ".h5seurat"),
  verbose = TRUE,
  ...
)

Arguments

obj	A single-cell object supported by scKirby. See converters for a table of all supported conversions.
save_path	Path to save the H5Seurat to.
verbose	Print messages.
...	Arguments passed on to SeuratDisk::as.h5Seurat

Examples

obj <- example_obj("seurat")
h5seurat <- seurat_to_h5seurat(obj)

bschilder/scKirby documentation built on Oct. 2, 2024, 10:16 p.m.