R/connectivityScore.R

In bhklab/PharmacoGx: Analysis of Large-Scale Pharmacogenomic Data

#' Function computing connectivity scores between two signatures
#' 
#' @inherit CoreGx::connectivityScore
#' @inheritParams CoreGx::connectivityScore
#' 
#' @export
connectivityScore <- 
  function(x, y, method=c("gsea", "fgsea", "gwc"), nperm=1e4, nthread=1, 
           gwc.method=c("spearman", "pearson"), ...) 
{
  CoreGx::connectivityScore(x, y, method, nperm, nthread, gwc.method, ...)
}