trainModel-CoxModel-method: Fit Models to the trainData in a CoxModel Object

In bhklab/PanCuRx: Pancreatic Ductal Adenocarcinoma Tool-Kit

Description

Computes models with the survival package for coxph, survfit, survdiff as well as computes the fit p-values using pchisq with the chisq values from survdiff. Modelling data is stored in modelData, as well as a data.table with all model data merged in modelDT. These items are all assigned to the models slot.

Usage

## S4 method for signature 'CoxModel'
trainModel(object)

Arguments

object

A CoxModel object to fit models for.

Value

A CoxModel object with the results of coxph, survfit and survdiff in the models slot as lists where each item corresponds to the data in modelData. For convenience, all the model data has also been merged into a single data.table in the modelDT item of models.

bhklab/PanCuRx documentation built on Dec. 30, 2021, 4:59 p.m.