ataudt/chromstaR: Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data
This package implements functions for combinatorial and differential analysis of ChIP-seq data. It includes uni- and multivariate peak-calling, export to genome browser viewable files, and functions for enrichment analyses.
Getting started
Browse package contents
Package details |
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| Author | Aaron Taudt, Maria Colome Tatche, Matthias Heinig, Minh Anh Nguyen |
| Bioconductor views | ATACSeq ChIPSeq DifferentialPeakCalling HiddenMarkovModel HistoneModification ImmunoOncology MultipleComparison PeakDetection Sequencing Software |
| Maintainer | Aaron Taudt <aaron.taudt@gmail.com> |
| License | Artistic-2.0 |
| Version | 1.21.4 |
| URL | https://github.com/ataudt/chromstaR |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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