API for armbrustlab/manta
Microbial Assemblage Normalized Transcript Analysis
| Global functions | |
|---|---|
| .MTDheatplot | Source code |
| .abs.nf | Source code |
| .aggBinCounts | Source code |
| .aggDESigCumDist | Source code |
| .as.DGEList | Source code |
| .as.manta | Source code |
| .blncd.dvrst.ct | Source code |
| .calcLibSizeNormFact | Source code |
| .calcMTDexpnt | Source code |
| .checkCondPair | Source code |
| .checkMetaLev | Source code |
| .compbias | Source code |
| .geomean.cmn.lib.size | Source code |
| .getCondFactor | Source code |
| .getCondGroups | Source code |
| .meta2metasum | Source code |
| .mtd | Source code |
| .normalize | Source code |
| .rawR | Source code |
| .setLibrarySizes | Source code |
| align2manta | Man page Source code |
| cmdArgsToVariables | Man page Source code |
| collapseRepliCounts | Man page Source code |
| compbiasPlot | Man page Source code |
| compbiasTest | Man page Source code |
| counts2manta | Man page Source code |
| generateWeights | Man page Source code |
| in2manta | Man page |
| makeSampleDF | Man page Source code |
| manta | Man page Source code |
| manta-class | Man page |
| manta.ra | Man page Source code |
| meta2counts | Man page Source code |
| metataxa2subcounts | Man page Source code |
| nf2nr | Man page Source code |
| normfact2absTMM | Man page Source code |
| nr | Man page Source code |
| outGenes | Man page Source code |
| plot.manta | Man page |
| pplacer2manta | Man page Source code |
| readSeastar | Man page Source code |
| seastar2counts | Man page Source code |
| summary.manta | Man page Source code |
| tableMetaSums | Man page Source code |
| tableMetas | Man page Source code |
