In ajabadi/mixOmics2: Omics Data Integration Project

library(knitr)
opts_chunk$set( echo = TRUE, eval = FALSE, warning = FALSE, fig.path = './images/', fig.asp = 1, out.width = "50%", cache = FALSE)
opts_knit$set(root.dir = "./images/", cache.path = "./images/")

This package is a developing implementation of mixOmics Bioconductor package.

The aim is to:

• implement roxygen2 documentation, and
• support MultiAssayExperiment datasets.
• support more intuitve input formats tailored to data integration such as formula class entry and support of assay names.

Installation:

The package is not complete/tested yet, but feel free to try it using:

devtools::install_github("ajabadi/mixOmics2")

You need to install the data package to be able to run the examples:

devtools::install_github("ajabadi/mixOmics.data")

ajabadi/mixOmics2 documentation built on Aug. 9, 2019, 1:08 a.m.