View source: R/dada_phyloseq.R
verify_pq | R Documentation |
Mostly for internal use in MiscMetabar functions.
verify_pq(
physeq,
verbose = FALSE,
min_nb_seq_sample = 500,
min_nb_seq_taxa = 1
)
physeq |
(required): a |
verbose |
(logical, default FALSE) If TRUE, prompt some warnings. |
min_nb_seq_sample |
(numeric) Only used if verbose = TRUE. Minimum number of sequences per samples to not show warning. |
min_nb_seq_taxa |
(numeric) Only used if verbose = TRUE. Minimum number of sequences per taxa to not show warning. |
Nothing if the phyloseq object is valid. An error in the other case. Warnings if verbose = TRUE
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