tests/testthat/test_checkPairedEnd.R
In UofABioinformaticsHub/strandCheckR: Calculate strandness information of a bam file
test_that("checkPairedEnd works correctly", {
fileP <- system.file("extdata", "ex1.bam", package="Rsamtools")
p <- checkPairedEnd(fileP)
fileS <- system.file("extdata","s1.sorted.bam", package = "strandCheckR")
s <- checkPairedEnd(fileS)
expect_true(p)
expect_false(s)
})
UofABioinformaticsHub/strandCheckR documentation built on Feb. 12, 2025, 11:15 a.m.
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test_that("checkPairedEnd works correctly", {
fileP <- system.file("extdata", "ex1.bam", package="Rsamtools")
p <- checkPairedEnd(fileP)
fileS <- system.file("extdata","s1.sorted.bam", package = "strandCheckR")
s <- checkPairedEnd(fileS)
expect_true(p)
expect_false(s)
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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