UMMS-Biocore/debrowser: Interactive Differential Expresion Analysis Browser
Bioinformatics platform containing interactive plots and tables for differential gene and region expression studies. Allows visualizing expression data much more deeply in an interactive and faster way. By changing the parameters, users can easily discover different parts of the data that like never have been done before. Manually creating and looking these plots takes time. With DEBrowser users can prepare plots without writing any code. Differential expression, PCA and clustering analysis are made on site and the results are shown in various plots such as scatter, bar, box, volcano, ma plots and Heatmaps.
Getting started
Browse package contents
Package details |
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| Author | Alper Kucukural <alper.kucukural@umassmed.edu>, Onur Yukselen <onur.yukselen@umassmed.edu>, Manuel Garber <manuel.garber@umassmed.edu> |
| Bioconductor views | ChIPSeq Clustering DifferentialExpression GeneExpression ImmunoOncology RNASeq Sequencing |
| Maintainer | Alper Kucukural <alper.kucukural@umassmed.edu> |
| License | GPL-3 + file LICENSE |
| Version | 1.31.2 |
| URL | https://github.com/UMMS-Biocore/debrowser |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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