Files in Shians/Glimma
Interactive HTML graphics
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
Glimma.Rproj
LICENSE
NAMESPACE
R/checkThat.R
R/dataDoc.R
R/glBar.R
R/glMDChecks.R
R/glMDPlot.R
R/glMDSPlot.R
R/glMDUtils.R
R/glScatter.R
R/glTable.R
R/glXYPlot.R
R/glimma.R
R/gllink.R
R/gltablink.R
R/hexcol.R
R/jsHelper.R
R/jsonConvert.R
R/package.R
R/plotWithTable.R
R/textUtils.R
R/utilities.R
README.md
data/arraydata.rda
data/datalist
data/lymphomaRNAseq.rda
images-doc/MDS-click.gif
images-doc/MDS-groups.gif
images-doc/point-click.gif
images-doc/point-hover.gif
images-doc/table-search.gif
inst/CITATION
inst/NEWS
inst/css/glimma.min.css
inst/css/src/images/animated-overlay.gif
inst/css/src/images/favicon.ico
inst/css/src/images/sort_asc.png
inst/css/src/images/sort_asc_disabled.png
inst/css/src/images/sort_both.png
inst/css/src/images/sort_desc.png
inst/css/src/images/sort_desc_disabled.png
inst/css/src/images/ui-bg_flat_0_aaaaaa_40x100.png
inst/css/src/images/ui-bg_flat_75_ffffff_40x100.png
inst/css/src/images/ui-bg_glass_55_fbf9ee_1x400.png
inst/css/src/images/ui-bg_glass_65_ffffff_1x400.png
inst/css/src/images/ui-bg_glass_75_dadada_1x400.png
inst/css/src/images/ui-bg_glass_75_e6e6e6_1x400.png
inst/css/src/images/ui-bg_glass_95_fef1ec_1x400.png
inst/css/src/images/ui-bg_highlight-soft_75_cccccc_1x100.png
inst/css/src/images/ui-icons_222222_256x240.png
inst/css/src/images/ui-icons_2e83ff_256x240.png
inst/css/src/images/ui-icons_454545_256x240.png
inst/css/src/images/ui-icons_888888_256x240.png
inst/css/src/images/ui-icons_cd0a0a_256x240.png
inst/index.html
inst/js/glimma.min.js
man-roxygen/desc_glMDSPlot.R
man-roxygen/params_glMDPlot.R
man-roxygen/params_glMDSPlot.R
man-roxygen/return_glMDPlot.R
man-roxygen/return_glMDSPlot.R
man/.Rapp.history
man/arraydata.Rd
man/as.hexcol.Rd
man/glBar.Rd
man/glBar.default.Rd
man/glMDPlot.DESeqDataSet.Rd
man/glMDPlot.DESeqResults.Rd
man/glMDPlot.DGEExact.Rd
man/glMDPlot.DGELRT.Rd
man/glMDPlot.MArrayLM.Rd
man/glMDPlot.Rd
man/glMDPlot.default.Rd
man/glMDRmd.Rd
man/glMDSPlot.DESeqDataSet.Rd
man/glMDSPlot.DGEList.Rd
man/glMDSPlot.Rd
man/glMDSPlot.default.Rd
man/glScatter.Rd
man/glScatter.default.Rd
man/glTable.Rd
man/glXYPlot.Rd
man/glimma.Rd
man/glimma_plot.Rd
man/gllink.Rd
man/gltablink.Rd
man/is.hex.Rd
man/lymphomaRNAseq.Rd
man/makeJson.Rd
man/makeJson.data.frame.Rd
man/makeJson.jschart.Rd
tests/testthat.R
tests/testthat/invalid_names_glMDPlot.RData
tests/testthat/little_mait_DGELRT.RData
tests/testthat/pasilla.RData
tests/testthat/test-checkThat.r
tests/testthat/test-glMDPlot.R
tests/testthat/test-glMDSPlot.R
tests/testthat/test-glMDUtils.R
tests/testthat/test-glXYPlot.R
tests/testthat/test-gllink.R
tests/testthat/test-hexcol.R
tests/testthat/test-jsonConvert.R
tests/testthat/test-textUtils.R
tests/testthat/test-utilities.R
tests/testthat/test_data_DESeqDataSet.RData
tests/testthat/test_data_DGEExact.RData
tests/testthat/test_data_DGELRT.RData
tests/testthat/test_data_MDS_DESeq.RData
tests/testthat/test_data_MDS_DGEList.RData
tests/testthat/test_data_voom.RData
tests/testthat/volcano_glXYPlot.RData
vignettes/Glimma.Rnw
vignettes/GlimmaWorkFlow.png
vignettes/Glimma_plotlayout.png
vignettes/MDSarray.png
vignettes/MDSgroups.png
vignettes/MDage.png
vignettes/MDanno.png
vignettes/MDarray.png
vignettes/XYarray.png
vignettes/XYvolcano.png
vignettes/quickstart_md.png
vignettes/quickstart_mds.png
