processDatasetResultSets: Processes JSON as a datasets result set

In PavlidisLab/Gemma-API: A wrapper for Gemma's Restful API to access curated gene expression data and differential expression analyses

Processes JSON as a datasets result set

Description

Processes JSON as a datasets result set

Usage

processDatasetResultSets(d)

Arguments

d	The JSON to process

Value

A data table with the queried datasets' resultSet ID(s). A list if raw = TRUE. Use get_differential_expression_values to get differential expression values (see examples). Use get_dataset_differential_expression_analyses to get more detailed information about a result set.

The fields of the output data.table are:

• resultSet.id: Internal ID given to the result set. Can be used to access the results using get_differential_expression_values

• factor.category: What is the category splitting the experimental groups in the result set (e.g. disease )

• factor.levels: What are the conditions that are compared in the result set (e.g control, bipolar disorder)

PavlidisLab/Gemma-API documentation built on Oct. 25, 2024, 10:25 a.m.