Liuy12/MBDDiff: MBDDiff for processing MBDcap-seq datasets
Here we presented a novel algorithm, termed MBDDiff, implemented as an R package that is designed specifically for processing MBDCap-seq datasets. MBDDiff contains three modules: quality assessment of datasets and quantification of DNA methylation; determination of differential methylation of promoter regions; and visualization functionalities.
Getting started
Browse package contents
Package details |
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| Author | Yuanhang Liu |
| Bioconductor views | CpGIsland DNAMethylation ExperimentalDesign QualityControl Sequencing Software Visualization |
| Maintainer | Yuanhang Liu <liuy12@uthscsa.edu> |
| License | GPL (>=3) |
| Version | 0.99.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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