API for LTLA/mumosa
Multi-Modal Single-Cell Analysis Methods
| Global functions | |
|---|---|
| .collate_sce_matrices | Source code |
| .collate_se_matrices | Source code |
| .compute_all_correlations | Source code |
| .compute_exact_neighbor_rho | Source code |
| .compute_exact_rho | Source code |
| .compute_mean_rho | Source code |
| .compute_multi_modal_metrics | Source code |
| .compute_wcss | Source code |
| .compute_wcss_delta | Source code |
| .compute_wcss_solo | Source code |
| .create_blocked_rank_matrix | Source code |
| .create_output_dataframe | Source code |
| .fill_names | Source code |
| .find_block_availability | Source code |
| .find_top_correlations | Source code |
| .format_xy_for_correlations | Source code |
| .organize_outputs | Source code |
| .rescale_modal_matrices | Source code |
| .run_pca | Source code |
| .summarize_wcss_gain | Source code |
| calculateMultiUMAP | Man page |
| calculateMultiUMAP,ANY-method | Man page |
| calculateMultiUMAP,SingleCellExperiment-method | Man page |
| calculateMultiUMAP,SummarizedExperiment-method | Man page |
| computeCorrelations | Man page |
| computeCorrelations,ANY-method | Man page |
| computeCorrelations,SummarizedExperiment-method | Man page |
| findTopCorrelations | Man page |
| findTopCorrelations,ANY-method | Man page |
| findTopCorrelations,SummarizedExperiment-method | Man page |
| intersectClusters | Man page Source code |
| intersectGraphs | Man page Source code |
| multiModalMNN | Man page Source code |
| rescaleByNeighbors | Man page |
| rescaleByNeighbors,ANY-method | Man page |
| rescaleByNeighbors,SingleCellExperiment-method | Man page |
| rescaleByNeighbors,SummarizedExperiment-method | Man page |
| runMultiUMAP | Man page Source code |
