Files in LTLA/bluster

Clustering Algorithms for Bioconductor

R/AffinityParam.R R/AgnesParam.R R/AllClasses.R R/AllGenerics.R R/BlusterParam.R R/ClaraParam.R R/DbscanParam.R R/DianaParam.R R/DmmParam.R R/FixedNumberParam.R R/HclustParam.R R/HierarchicalParam.R R/KmeansParam.R R/MbkmeansParam.R R/NNGraphParam.R R/PamParam.R R/RcppExports.R R/SomParam.R R/TwoStepParam.R R/approxSilhouette.R R/bluster-package.R R/bootstrapStability.R R/clusterRMSD.R R/clusterSweep.R R/compareClusterings.R R/linkClusters.R R/makeSNNGraph.R R/mergeCommunities.R R/neighborPurity.R R/nestedClusters.R R/pairwiseModularity.R R/pairwiseRand.R R/utils.R README.md man/AffinityParam-class.Rd man/AgnesParam-class.Rd man/BlusterParam-class.Rd man/ClaraParam-class.Rd man/DbscanParam-class.Rd man/DianaParam-class.Rd man/DmmParam-class.Rd man/FixedNumberParam-class.Rd man/HclustParam-class.Rd man/HierarchicalParam-class.Rd man/KmeansParam-class.Rd man/MbkmeansParam-class.Rd man/NNGraphParam-class.Rd man/PamParam-class.Rd man/SomParam-class.Rd man/TwoStepParam-class.Rd man/approxSilhouette.Rd man/bluster-package.Rd man/bootstrapStability.Rd man/clusterRMSD.Rd man/clusterRows.Rd man/clusterSweep.Rd man/compareClusterings.Rd man/defaultArguments.Rd man/linkClusters.Rd man/makeSNNGraph.Rd man/mergeCommunities.Rd man/neighborPurity.Rd man/nestedClusters.Rd man/pairwiseModularity.Rd man/pairwiseRand.Rd tests/testthat.R tests/testthat/test-affinity-param.R tests/testthat/test-agnes-param.R tests/testthat/test-bootstrap.R tests/testthat/test-clara-param.R tests/testthat/test-cluster-rmsd.R tests/testthat/test-dbscan-param.R tests/testthat/test-diana-param.R tests/testthat/test-dmm-param.R tests/testthat/test-hclust-param.R tests/testthat/test-kmeans-param.R tests/testthat/test-link-clusters.R tests/testthat/test-make-snn.R tests/testthat/test-mbkmeans-param.R tests/testthat/test-merge-comm.R tests/testthat/test-modularity.R tests/testthat/test-nested-clusters.R tests/testthat/test-nngraph-param.R tests/testthat/test-pam-param.R tests/testthat/test-purity.R tests/testthat/test-rand.R tests/testthat/test-silhouette.R tests/testthat/test-som-param.R tests/testthat/test-sweep.R tests/testthat/test-twostep-param.R vignettes/clusterRows.Rmd vignettes/diagnostics.Rmd