KlausVigo/tanggle: Visualization of Phylogenetic Networks
Offers functions for plotting split (or implicit) networks (unrooted, undirected) and explicit networks (rooted, directed) with reticulations extending. 'ggtree' and using functions from 'ape' and 'phangorn'. It extends the 'ggtree' package [@Yu2017] to allow the visualization of phylogenetic networks using the 'ggplot2' syntax. It offers an alternative to the plot functions already available in 'ape' Paradis and Schliep (2019) <doi:10.1093/bioinformatics/bty633> and 'phangorn' Schliep (2011) <doi:10.1093/bioinformatics/btq706>.
Getting started
Browse package contents
Package details |
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| Bioconductor views | Alignment Clustering DataImport MultipleSequenceAlignment Phylogenetics Software Visualization |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 1.1.1 |
| URL | https://klausvigo.github.io/tanggle https://github.com/KlausVigo/tanggle |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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