numCodons: Get number of codons
In JokingHero/ORFik: Open Reading Frames in Genomics
numCodons R Documentation
Get number of codons
Description
Length of object / 3.
Choose either only whole codons, or with stubs.
ORF stubs are not relevant, since there are no correctly defined
ORFs that are 17 bases long etc.
Usage
numCodons(grl, as.integer = TRUE, keep.names = FALSE)
Arguments
grl
a GRangesList object
as.integer
a logical (TRUE), remove stub codons
keep.names
a logical (FALSE)
Value
an integer vector
JokingHero/ORFik documentation built on Oct. 21, 2024, 11:42 a.m.
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| numCodons | R Documentation |
Get number of codons
Description
Length of object / 3. Choose either only whole codons, or with stubs. ORF stubs are not relevant, since there are no correctly defined ORFs that are 17 bases long etc.
Usage
numCodons(grl, as.integer = TRUE, keep.names = FALSE)
Arguments
grl |
a |
as.integer |
a logical (TRUE), remove stub codons |
keep.names |
a logical (FALSE) |
Value
an integer vector
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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