getGRanges: Internal GRanges loader from fst data.frame
In JokingHero/ORFik: Open Reading Frames in Genomics
getGRanges R Documentation
Internal GRanges loader from fst data.frame
Description
Internal GRanges loader from fst data.frame
Usage
getGRanges(df, seqinfo = NULL)
Arguments
df
a data.frame with columns minimum 4 columns:
seqnames, start, strand
Additional specific columns are:
- width (if not set, width is set to 1 for all reads)
Additional columns will be assigned as meta columns
seqinfo
Seqinfo object, defaul NULL (created from ranges).
Add to avoid warnings later on differences in seqinfo.
Value
GRanges object
JokingHero/ORFik documentation built on Oct. 21, 2024, 11:42 a.m.
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| getGRanges | R Documentation |
Internal GRanges loader from fst data.frame
Description
Internal GRanges loader from fst data.frame
Usage
getGRanges(df, seqinfo = NULL)
Arguments
df |
a data.frame with columns minimum 4 columns:
seqnames, start, strand |
seqinfo |
Seqinfo object, defaul NULL (created from ranges). Add to avoid warnings later on differences in seqinfo. |
Value
GRanges object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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