Files in JohnMengChun/ceRNAmiRNAfun
A package of creating an algorithm of identifying microRNA-competing endogenous RNA triplets
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/ceRNAmiRNAfun.R
R/data_Realdata.R
R/data_Result_TCGA_LUSC.R
R/data_dictionary.R
R/data_gene_sam.R
R/data_miRNA_total.R
R/data_miRhubgeneoutput.R
R/data_mirna_sam.R
R/miRhubgene.R
R/miRhubgeneplot.R
R/segcluster_peakmerge.R
R/sliding_windows.R
README.md
ceRNAmiRNAfun.Rproj
data/Realdata.rda
data/Result_TCGA_LUSC.rda
data/dictionary.rda
data/gene_sam.rda
data/miRNA_total.rda
data/miRhubgeneoutput.rda
data/mirna_sam.rda
inst/CITATION.txt
inst/NEWS.Rd
inst/ceRNAmiRNAfun.pdf
inst/extdata/LUSCResulttest.rds
inst/extdata/LUSCdatatest.rds
inst/extdata/TCGA-LUSC_MirnaTarget_dictionaryuse.rds
inst/extdata/genetest3.csv
inst/extdata/miRNAtotalname.csv
inst/extdata/miRhubgeneoutput.csv
inst/extdata/mirtest3.csv
inst/pics/plotp.png
inst/pics/workflow_ceRNAmiRNAfun.png
man/Datalist_sliding_w.Rd
man/Realdata.Rd
man/Result_TCGA_LUSC.Rd
man/ceRNAmiRNAfun.Rd
man/dictionary.Rd
man/gene_sam.Rd
man/miRNA_total.Rd
man/miRhubgene.Rd
man/miRhubgeneplot.Rd
man/mirna_sam.Rd
man/segcluster_peakmerge.Rd
vignettes/introduction_to_ceRNAmiRNAfun.Rmd
vignettes/pics/plotp.png
vignettes/pics/workflow_ceRNAmiRNAfun.png
