| .BStringSetToDotBracketStringSet |
Source code
|
| .BStringToDotBracketString |
Source code
|
| .BStringToDotBracketStringSet |
Source code
|
| .CSDataFrameList_To_CSDotBracketDataFrameList |
Source code
|
| .DataFrame_To_DotBracketDataFrame |
Source code
|
| .DotBracketStringSet.show_frame |
Source code
|
| .DotBracketStringSet.show_frame_line |
Source code
|
| .DotBracketStringSetToIntegerList |
Source code
|
| .IntegerListToDotBracketStringSet |
Source code
|
| .SimpleDataFrameList_To_DotBracketDataFrameList |
Source code
|
| .SimpleSplitDataFrameList_To_SimpleSplitDotBracketDataFrameList |
Source code
|
| .add_DotBracket_colors |
Source code
|
| .adjust_DotBracketDataFrame_col_types |
Source code
|
| .check_for_dbtype_dbdf |
Source code
|
| .check_for_dbtype_string |
Source code
|
| .check_for_invalid_db_letters |
Source code
|
| .check_for_invalid_db_values |
Source code
|
| .check_matched_postions |
Source code
|
| .convert_char_type_to_character |
Source code
|
| .convert_db_annotation |
Source code
|
| .flatten_input_list |
Source code
|
| .get_db_types |
Source code
|
| .get_dot_bracket |
Source code
|
| .get_idx_of_loops_from_dbdfl |
Source code
|
| .get_idx_of_loops_from_dbs |
Source code
|
| .get_pairing |
Source code
|
| .integerToDotBracketString |
Source code
|
| .integerToDotBracketStringSet |
Source code
|
| .is_a_bool |
Source code
|
| .needs_letters_normalized |
Source code
|
| .norm_DotBracketDataFrame_input |
Source code
|
| .norm_bracket_type |
Source code
|
| .norm_dbdf_bracket_type |
Source code
|
| .norm_letters |
Source code
|
| .normarg_structure |
Source code
|
| .onLoad |
Source code
|
| .onUnload |
Source code
|
| .pos_letters |
Source code
|
| .read_StructuredXStringSet |
Source code
|
| .rename_unnamed_args |
Source code
|
| .str_replace_all_custom |
Source code
|
| .subseq |
Source code
|
| .toSeqSnippet |
Source code
|
| .valid.DotBracketDataFrame |
Source code
|
| .valid.DotBracketDataFrameList |
Source code
|
| .valid.DotBracketString |
Source code
|
| .valid.DotBracketStringSet |
Source code
|
| .valid.LoopIndexList |
Source code
|
| .valid.StructuredXStringSet |
Source code
|
| CompressedSplitDotBracketDFrameList-class |
Man page
|
| CompressedSplitDotBracketDataFrameList-class |
Man page
|
| DB |
Man page
Source code
|
| DBDF |
Man page
Source code
|
| DBDFL |
Man page
Source code
|
| DBS |
Man page
Source code
|
| DBSL |
Man page
Source code
|
| DOTBRACKET_ALPHABET |
Man page
|
| DOTBRACKET_CHAR_VALUES |
Man page
|
| DotBracketDFrame-class |
Man page
|
| DotBracketDFrameList-class |
Man page
|
| DotBracketDataFrame |
Man page
Source code
|
| DotBracketDataFrame-class |
Man page
|
| DotBracketDataFrameList |
Man page
Source code
|
| DotBracketDataFrameList-class |
Man page
|
| DotBracketString |
Man page
Source code
|
| DotBracketString-class |
Man page
|
| DotBracketStringSet |
Man page
Source code
|
| DotBracketStringSet-class |
Man page
|
| DotBracketStringSet-io |
Man page
|
| DotBracketStringSetList |
Man page
Source code
|
| DotBracketStringSetList-class |
Man page
|
| LoopIndexList |
Man page
Source code
|
| LoopIndexList-class |
Man page
|
| SDBDFL |
Man page
Source code
|
| STRUCTURE_CLOSE_CHR |
Man page
|
| STRUCTURE_NEUTRAL_CHR |
Man page
|
| STRUCTURE_OPEN_CHR |
Man page
|
| SimpleSplitDotBracketDFrameList-class |
Man page
|
| SimpleSplitDotBracketDataFrameList-class |
Man page
|
| SplitDotBracketDataFrameList |
Man page
Source code
|
| Structstrings |
Man page
|
| Structstrings-data |
Man page
|
| Structstrings-internals |
Man page
|
| Structstrings-package |
Man page
|
| StructuredRNAStringSet |
Man page
Source code
|
| StructuredRNAStringSet-class |
Man page
|
| StructuredXStringSet |
Man page
Source code
|
| [<-,DotBracketDataFrame-method |
Man page
|
| add_colors |
Source code
|
| alphabet,DotBracketString-method |
Man page
|
| colnames<-,CompressedSplitDotBracketDataFrameList-method |
Man page
|
| convertAnnotation |
Man page
|
| convertAnnotation,DotBracketString-method |
Man page
|
| convertAnnotation,DotBracketStringSet-method |
Man page
|
| convertAnnotation,DotBracketStringSetList-method |
Man page
|
| dbs |
Man page
|
| dotbracket |
Man page
|
| dotbracket,StructuredXStringSet-method |
Man page
|
| dotbracket<- |
Man page
|
| dotbracket<-,StructuredXStringSet-method |
Man page
|
| encoding,DotBracketString-method |
Man page
|
| getBasePairing |
Man page
|
| getBasePairing,DotBracketString-method |
Man page
|
| getBasePairing,DotBracketStringSet-method |
Man page
|
| getBasePairing,StructuredXStringSet-method |
Man page
|
| getDotBracket |
Man page
|
| getDotBracket,CompressedSplitDotBracketDataFrameList-method |
Man page
|
| getDotBracket,DotBracketDataFrame-method |
Man page
|
| getDotBracket,DotBracketDataFrameList-method |
Man page
|
| getDotBracket,SimpleSplitDotBracketDataFrameList-method |
Man page
|
| getLoopIndices |
Man page
|
| getLoopIndices,CompressedSplitDotBracketDataFrameList-method |
Man page
|
| getLoopIndices,DotBracketDataFrame-method |
Man page
|
| getLoopIndices,DotBracketDataFrameList-method |
Man page
|
| getLoopIndices,DotBracketString-method |
Man page
|
| getLoopIndices,DotBracketStringSet-method |
Man page
|
| getLoopIndices,SimpleSplitDotBracketDataFrameList-method |
Man page
|
| getLoopIndices,StructuredXStringSet-method |
Man page
|
| make_DOTBRACKET_COLORED_LETTERS |
Source code
|
| nseq |
Man page
|
| readDotBracketStringSet |
Man page
Source code
|
| readStructuredRNAStringSet |
Man page
Source code
|
| saveDotBracketStringSet |
Man page
Source code
|
| seqtype,DotBracketString-method |
Man page
|
| subseq,DotBracketString-method |
Man page
|
| subseq<-,DotBracketString-method |
Man page
|
| subseq<-,DotBracketStringSet-method |
Man page
|
| writeDotBracketStringSet |
Man page
Source code
|
| writeStructuredXStringSet |
Man page
Source code
|
