DanrleyRF/SWeeP: Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences
The SWeeP method was developed to favor the analizes between amino acids sequences and to assist alignment free phylogenetic studies. This method is based on the concept of sparse words, which is applied in the scan of biological sequences and its the conversion in a matrix of ocurrences. Aiming the generation of low dimensional matrices of Amino Acid Sequence occurrences.
Getting started
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Package details |
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| Bioconductor views | Alignment Genetics Sequencing Software StatisticalMethod SupportVectorMachine Technology |
| Maintainer | |
| License | GPL-3 |
| Version | 3.13.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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