Man pages for BioHPC/iCAT
immune Cell Analysis Tool
| classMat | Classification matrix estimating accuracy of model. |
| getLib | Dataframe of TARSs library. |
| iCATinteractive | Launch interactive interface |
| plotHist | Plot histogram of clonotype frequencies in negative and... |
| pred | Predict the exposure status of an independent sample. |
| processFiles | Internal function for transforming input files. |
| readTrn | Read input training data. |
| savePlot | Save plot to pdf. |
| train | Main training function. |
| trnStats | Statistics about training data. |
| tsvDir | List TSV files in a directory. |
