BgeeCall allows to generate present/absent gene expression calls without using an arbitrary cutoff like TPM<1. Calls are generated based on reference intergenic sequences. These sequences are generated based on expression of all RNA-Seq libraries of each species integrated in Bgee (https://bgee.org).
Package details |
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Bioconductor views | GeneExpression RNASeq Software |
Maintainer | |
License | GPL-3 + file LICENSE |
Version | 1.12.2 |
URL | https://github.com/BgeeDB/BgeeCall |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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