run: Core function to generate results

In datelife: Scientific Data on Time of Lineage Divergence for Your Taxa

Core function to generate results

Description

Core function to generate results

Usage

run(
  input = c("Rhea americana", "Pterocnemia pennata", "Struthio camelus"),
  format = "citations",
  partial = "yes",
  plot.width = 600,
  plot.height = 600,
  use_tnrs = "no",
  opentree_chronograms = NULL
)

Arguments

input	A newick string or vector of taxa
format	The output format
partial	How to deal with trees that have a subset of taxa in the query
plot.width	Width in pixels for output plot
plot.height	Height in pixels for output plot
use_tnrs	Whether to use OpenTree's TNRS for the input
opentree_chronograms	The list of lists containing the input trees and other info

Value

results in the desired format

datelife documentation built on July 10, 2023, 2:02 a.m.